
The EpiXplore Methylated DNA Enrichment Kit provides a simple magnetic bead-based method for enriching and fractionating both hypo- and hypermethylated DNA from the whole genome. Enrichment leads to superior results in gene regulation studies by reducing background during sequencing.
The EpiXplore Methylated DNA Enrichment Kit provides a simple magnetic bead-based method for enriching and fractionating both hypo- and hypermethylated DNA from the whole genome. Enrichment leads to superior results in gene regulation studies by reducing background during sequencing.
Why choose the EpiXplore Methylated DNAEnrichment Kit?
- The EpiXplore protocol is based on affinity binding between methylated DNA and Methylated DNA Binding Domain Protein 2 (MBD2).
- It does not require any antibodies or follow an immunoprecipitation (IP) protocol.
- Its flexible protocol allows you to elute your methylated DNA in fractions (by methylation density) or as a single fraction.
By contrast, antibody-based (IP) enrichment methods, including MeDIP, lack flexibility and the necessary pretreatments often result in loss of starting material. More importantly, antibody-based enrichment is “all or none”—that is, it does not allow gradient separation of methylated DNA.
Why fractionate by methylation density?
Recent reports indicate that regions of the genome with medium to low density methylation (including regions far from promoters and CpG islands) can play an important role in differential gene regulation. If you are looking for a comprehensive picture of methylation activity, differentiating these regions is an important first step. Only the EpiXplore Methylated DNA Enrichment Kit includes elution buffers which allow you to split your enriched methylated DNA into three fractions, based on methylation density.
How many methylated sites are required for binding?
The EpiXplore Methylated DNA Enrichment Kit contains a fragment of the MBD2 protein which provides high sensitivity. The kit can enrich DNA fragments containing as few as three methylated CpG pairs (6 total methylation sites).
Can your current enrichment method compete?
Is your enriched methylated DNA… | EpiXplore protocol | Antibody-based protocols |
---|---|---|
HTS-ready? | YES. Enriched methylated DNA is double-stranded and ready for use | No. Enriched DNA requires further processing |
Intact? | YES. Uses a gentle (magnetic) separation process | No. Harsh separation conditions often lead to sample loss |
Easy to elute? | YES. Uses a simple buffer-based protocol | No. Elution requires multiple complex steps |
Separated by methylation density? | YES. Methylated DNA can be eluted in low, medium, and high density fractions or as a single fraction | No. Elution is “all or none” |
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(一)双抗体夹心法
(二)间接法
(三)竞争法
(四)双位点一步法
(五)捕获法测IgM抗体
(六)应用亲和素和生物素的ELISA
1.标准曲线的标准品是否一定要梯度稀释,为什么?我试过非梯度稀释的,也可以达到线性R2=0.99.
2.我用了CurveExpert做标曲,自动搜索后发现有10种提供的方程,各种形式的,其中一个十分适合我的实验结果(LogisticModel),而其他的感觉又不适合,因为结果常常为负值。这又是为啥捏?
3.实验的酶标仪最大OD值可以测到4,如果我的测量结果在1.3,是否像其他人所说的>1了就不准确了。
4.利用夹心法进行定量分析是否一定要使用线性方程?
不好意思啊,一下问了这么多问题,最近做了一个月的ELISA,完全摸不清头脑啊。谢谢各位了
(2)封闭:将已包被的板用洗涤液洗涤2次,每孔加入120 μL封闭液,封闭一段时间,取出,甩干备用。
(3)竞争反应:在制备好的板中每孔加入50 μL系列浓度的标准品溶液和50 μL稀释好的酶标抗体溶液,孵育一段时间。
(4)洗板:用洗涤液洗涤5次。
(5)显色反应:每孔加入显色溶液100 μL,孵育一段时间。
(6)终止:每孔各加入终止液,在酶标仪上测定各孔的吸光值。
1. 包被:用0.05M PH9,碳酸盐包被缓冲液将抗体稀释至蛋白质含量为1~10μg/ml,在每个聚苯乙烯板的反应孔中加0.1ml,4℃过夜。次日,弃去孔内溶液,用洗涤缓冲液洗3次,每次3分钟。
2. 加样:加一定稀释的待检样品0.1ml于上述已包被之反应孔中,置37℃孵育1小时。然后洗涤。(同时做空白孔,阴性对照孔及阳性对照孔)。
3. 加酶标抗体:于各反应孔中,加入新鲜稀释的酶标抗体(经滴定后的稀释度)0.1ml,37℃孵育0.5~1小时,洗涤。
4. 加底物液显色:于各反应孔中加入临时配制的TMB底物溶液0.1ml,37℃10~30分钟。
5. 终止反应:于各反应孔中加入2M硫酸0.05ml。
6. 结果判定:可于白色背景上,直接用肉眼观察结果:反应孔内颜色越深,阳性程度越强,阴性反应为无色或极浅,依据所呈颜色的深浅,以“+”、“-”号表示。也可测OD值:在ELISA检测仪上,于450nm(若以ABTS显色,则410nm)处,以空白对照孔调零后测各孔OD值,若大于规定的阴性对照OD值的2.1倍,即为阳性。
方法二:用于检测未知抗体的间接法:
用包被缓冲液将已知抗原稀释至1~10μg/ml,每孔加0.1ml,4℃过夜。次日洗涤3次。加一定稀释的待检样品(未知抗体)0.1ml于上述已包被之反应孔中,置37℃孵育1小时,洗涤。(同时做空白、阴性及阳性孔对照)于反应孔中,加入新鲜稀释的酶标第二抗体(抗抗体)0.1ml,37℃孵育30~60分钟,洗涤,最后一遍用DDW洗涤。其余步骤同“双抗体夹心法”的4、5、6。
(1) 包被:用0.05M PH9.牰碳酸盐包被缓冲液将抗体稀释至蛋白质含量为1~10μg/ml。在每个聚苯乙烯板的反应孔中加0.1ml,4℃过夜。次日,弃去孔内溶液,用洗涤缓冲液洗3次,每次3分钟。(简称洗涤,下同)。
(2) 加样:加一定稀释的待检样品0.1ml于上述已包被之反应孔中,置37℃孵育1小时。然后洗涤。(同时做空白孔,阴性对照孔及阳性对照孔)。
(3) 加酶标抗体:于各反应孔中,加入新鲜稀释的酶标抗体(经滴定后的稀释度)0.1ml。37℃孵育0.5~1小时,洗涤。
(4) 加底物液显色:于各反应孔中加入临时配制的TMB底物溶液0.1ml,37℃10~30分钟。
(5) 终止反应:于各反应孔中加入2M硫酸0.05ml。
(6) 结果判定:可于白色背景上,直接用肉眼观察结果:反应孔内颜色越深,阳性程度越强,阴性反应为无色或极浅,依据所呈颜色的深浅,以“+”、“-”号表示。也可测O·D值:在ELISA检测仪上,于450nm(若以ABTS显色,则410nm)处,以空白对照孔调零后测各孔O·D值,若大于规定的阴性对照OD值的2.1倍,即为阳性。
间接法:
用包被缓冲液将已知抗原稀释至1~10μg/ml,每孔加0.1ml,4℃过夜。次日洗涤3次。加一定稀释的待检样品(未知抗体)0.1ml于上述已包被之反应孔中,置37℃孵育1小时,洗涤。(同时做空白、阴性及阳性孔对照)于反应孔中,加入新鲜稀释的酶标第二抗体(抗抗体)0.1ml,37℃孵育30-60分钟,洗涤,最后一遍用DDW洗涤。其余步骤同“双抗体夹心法”的4、5、6。

