Highlights
- Easy Handling: Bypass chloroform, phase separation and precipitation steps.
- NGS-Ready: Ultra-pure RNA without phenol carryover. No DNA contamination (DNase I included).
- Non-Biased: Complete RNA recovery without miRNA loss.
Description
| Compatibility | TRIzol®, RNAzol®, QIAzol®, TriPure™, TriSure™ and all other acid-guanidinium-phenol based solutions can be used in place of TRI Reagent®. |
|---|---|
| Equipment | Microcentrifuge, vortex |
| Sample Inactivation | TRI Reagent® (provided with R2061, R2063) inhibits RNase activity and inactivates viruses and other infectious agents. |
| Sample Source | Any sample stored and preserved in TRI Reagent®, TRIzol® or similar (animal cells, tissue, bacteria, yeast, fecal, biological fluids, and in vitro processed RNA (e.g., transcription products, DNase-treated or labeled RNA)). |
| Size Range | Total RNA ≥ 17 nt |
| Yield | 10 µg RNA (binding capacity), ≥6 µl (elution volume) |
Q1: Is Direct-zol suitable for very small numbers of cells?
Yes, the Direct-zol MicroPrep (#R2060) is designed and capable of purifying RNA down to single cell inputs (picogram amounts). A sensitive quantification method is needed (e.g. Qubit, qPCR, etc.)
Q2: Is DNase I available for individual purchase?
All kit components are available for purchase separately.
Q3: How to store DNase-I following resuspension?
Lyophilized DNase I is stable at room temperature. Once resuspended, store frozen aliquots. Minimize freeze thaw cycles as much as possible. Freeze thaw will lower DNase activity.
Q4: Is the DNase-I treatment necessary?
If the downstream application requires DNA-free RNA, we recommend performing the DNase I treatment.
Q5: Is the kit compatible with samples stored in DNA/RNA Shield?
Yes, bring samples homogenized and stored in DNA/RNA Shield to room temperature (20-30ºC). Add 3 volume of TRIzol/TRI Reagent and mix well. Proceed with RNA Purification.
Q6: Is it possible to extract proteins with the Direct-zol RNA kits?
Yes, proteins can be Acetone Precipitated post RNA binding step. Please request supplementary protocol from Zymo Research Technical Support.
Q7: I ran out of RNA Wash Buffer. Can I use something else?
Yes, use 80% ethanol as a substitute. RNA Wash Buffer is also sold separately.
Q8: Can samples be stored in TRIzol/TRI Reagent prior to processing?
Yes, samples in TRIzol/TRI Reagent or similar are stable overnight at room temperature and can be stored frozen (-80C). Be sure to lyse and homogenize the sample well prior to freezing. Bring the sample to room temperature prior to RNA Purification.
Q9: Is it possible to isolate DNA with the Direct-zol RNA kits?
Direct-zol DNA/RNA (D2080) kits can isolate DNA from TRIzol
Q10: Is the RNA suitable for Next-Gen sequencing or other sensitive downstream applications?
Yes, the RNA is high quality (A260/A280 >1.8, A260/A230 >1.8) and suitable for any downstream application, including NGS, RT-PCR, hybridization, etc.
Q11: Which phenol-based reagents are compatible with Direct-zol?
The Direct-zol kits are compatible with TRI Reagent, TRIzol, Qiazol, RNAzol, TriPure, TriSure, etc., and any other acid-guanidinium phenol-based reagents.
Q12: What is the difference between the Direct-zol RNA and Quick-RNA kits?
Direct-zol is for samples stored/collected into TRIzol/similar reagents. Quick-RNA is for all other samples.
Q13: What is the difference between the Direct-zol RNA MiniPrep and the Direct-zol RNA MiniPrep Plus?
Both kits function the same, the only difference is the RNA binding capacity of the column provided with the kit.
“Before I discovered this kit, I was isolating RNA the old school way with chloroform and it would take half the day to finish the protocol. The Direct-zol RNA Miniprep kit is AWESOME!It took hardly any time, the protocol was so easy, and my RNA quality was SO much better. Honestly, this kit revolutionized my life at the bench.”
-A. Newhart (The Wistar Institute)
“Simple protocol and yielded good quality of RNA. Only one kit working for all type of tissue, cell and especially biological fluids.”
-Mohan K. (University of Illinois, Chicago)
“Previously I used a protocol that took 3 hours, now I can have my RNA in 20 minutes. What is not to like about that? Just one column and two buffers, I love it.”
-Arjan V. (Indiana University)
Read More| Cat # | Name | Size | Price | |
|---|---|---|---|---|
| E1010-1-16 | DNA Digestion Buffer | 16 mL | $29.00 | |
| R2050-1-50 | TRI Reagent | 50 ml | $70.00 | |
| R2050-1-200 | TRI Reagent | 200 ml | $219.00 | |
| E1010-1-4 | DNA Digestion Buffer | 4 mL | $15.00 | |
| W1001-10 | DNase/RNase-Free Water | 10 ml | $19.00 | |
| W1001-4 | DNase/RNase-Free Water | 4 ml | $12.00 | |
| R2050-2-160 | Direct-zol RNA PreWash (Concentrate) | 160 ml | $166.00 | |
| R2050-2-40 | Direct-zol RNA PreWash (Concentrate) | 40 ml | $42.00 | |
| C1001-50 | Collection Tubes | 50 Pack | $15.00 | |
| R2062 | Direct-zol RNA Microprep | 200 preps | $545.00 | |
| R2060 | Direct-zol RNA Microprep | 50 preps | $175.00 | |
| C1004-50 | Zymo-Spin IC Columns | 50 Pack | $53.00 | |
| R1003-3-48 | RNA Wash Buffer | 48 ml | $105.00 | |
| R1003-3-12 | RNA Wash Buffer | 12 ml | $30.00 | |
| E1010 | DNase I Set | 250 U | $56.00 |
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所以想请大家给推荐一个效果好的最好是国产的质粒提取试剂盒。
多谢！
你的荧光染料具体是哪一种？你可以通过染色试验来决定是否有效啊？一般荧光染料染色后，都会呈现明亮的颜色，比一般同样颜色要亮的多。只要能染上、只要有亮度，就是没失效。
什么是纯荧光校正，多长时间校正一次：
纯荧光校正是测定各种纯荧光染料标准品的波长和信号强度，通俗地说是让仪器“认识”各种荧光染料。软件收集并储存各种纯荧光染料标准品的荧光信息。以后每次定量实验运行过程中，SDS软件收集样品的原始光谱信号，并将此原始光谱与纯荧光文件中的数据进行比较，精确扣除不同染料的信号重叠部分，从而确定样品中的荧光染料种类和信号强度。
推荐每半年进行一次纯荧光校正。在运行光谱校正之前，请先进行背景校正和ROI校正。
检测荧光信号的步骤有误:一般SG法采用72℃延伸时采集，Taqman法则一般在退火结束时或延伸结束采集信号。
引物或探针降解:可通过PAGE电泳检测其完整性。
模板量不足:对未知浓度的样品应从系列稀释样本的最高浓度做起。
模板降解:避免样品制备中杂质的引入及反复冻融的情况。
2.Ct值出现过晚(Ct>38)
扩增效率低:反应条件不够优化。设计更好的引物或探针;改用三步法进行反应;适当降低退火温度;增加镁离子浓度等。
PCR各种反应成分的降解或加样量的不足。
PCR产物太长:一般采用80-150bp的产物长度。
3.标准曲线线性关系不佳
加样存在误差:使得标准品不呈梯度。
标准品出现降解:应避免标准品反复冻融，或重新制备并稀释标准品。
引物或探针不佳:重新设计更好的引物和探针。
模板中存在抑制物，或模板浓度过高
4.负对照有信号
引物设计不够优化：应避免引物二聚体和发夹结构的出现。
引物浓度不佳：重庆新桥医院网上预约挂号www.cqxqyy.net适当降低引物的浓度，并注意上下游引物的浓度配比。
镁离子浓度过高：适当降低镁离子浓度，或选择更合适的mix试剂盒。
模板有基因组的污染：RNA提取过程中避免基因组DNA的引入，或通过引物设计避免非特异扩增。
5.溶解曲线不止一个主峰
引物设计不够优化：应避免引物二聚体和发夹结构的出现。
引物浓度不佳：适当降低引物的浓度，并注意上下游引物的浓度配比。
镁离子浓度过高：适当降低镁离子浓度，或选择更合适的mix试剂盒。
模板有基因组的污染：RNA提取过程中避免基因组DNA的引入，或通过引物设计避免非特异扩增。
6.扩增效率低
反应试剂中部分成分特别是荧光染料降解。
反应条件不够优化：可适当降低退火温度或改为三步扩增法。
反应体系中有PCR反应抑制物：一般是加入模板时所引入，应先把模板适度稀释，再加入反应体系中，减少抑制物的影响。
7.同一试剂在不同仪器上产生不同的曲线，如何判断?
判断标准：扩增效率，灵敏度，特异性
如果扩增效率在90%-110%，都是特异性扩增，都可以把数据用于分析。
8.扩增曲线的异常?比如“S”型曲线?
参比染料设定不正确(MasterMix不加参比染料时，选NONE)
模板的浓度太高或者降解
荧光染料的降解
